ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1dnwD1 - ECOD Domain | ECOD

ECOD/Domains/e1dnwD1

e1dnwD1

UID: 005087623

PDB

Range: D:2-465
PDB: 1DNW chain D(all domains)
UniProt: P05164 (all domains)
Gene: MPO

Molecule: MYELOPEROXIDASE

3D Structure

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Related Domains

Browse other domains in An_peroxidase →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupHeme-dependent peroxidases(136)

HH-groupHeme-dependent peroxidases(136.1)

TT-groupHeme-dependent peroxidases(136.1.1)

FFamilyAn_peroxidase(136.1.1.3)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal
Cyanide ionCYN
Protoporphyrin ix containing feHEM
2-acetamido-2-deoxy-beta-D-glucopyranoseNAG
Thiocyanate ionSCN

+ 2 additives (Acetic acid, Sulfate ion)

Pfam Families

PF03098An_peroxidase

Animal haem peroxidase

ClanCL0617Peroxidase

External Links

ECOD PDB View: 1DNW RCSB PDB: 1DNW PDBe: 1DNW UniProt: P05164

Downloads

Download Domain PDB Full PDB Structure

Acetic acidACY
Sulfate ionSO4

Shown in the structure viewer.