ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6yjqBBB1 - ECOD Domain | ECOD

ECOD/Domains/e6yjqBBB1

e6yjqBBB1

UID: 005102438

PDB

Range: BBB:1-210
PDB: 6YJQ chain BBB(all domains)

Molecule: Alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A,Alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A

3D Structure

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Related Domains

Browse other domains in Glyco_transf_18 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupUDP-Glycosyltransferase/glycogen phosphorylase(7512)

HH-groupUDP-Glycosyltransferase/glycogen phosphorylase(7512.1)

TT-groupUDP-Glycosyltransferase/glycogen phosphorylase(7512.1.1)

FFamilyGlyco_transf_18(7512.1.1.34)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (1,2-ETHANEDIOL, Sulfate ion)

1,2-ETHANEDIOLEDO
Sulfate ionSO4

Shown in the structure viewer.

Pfam Families

PF15024Glyco_transf_18

Glycosyltransferase family 18

ClanCL0113GT-B

External Links

ECOD PDB View: 6YJQ RCSB PDB: 6YJQ PDBe: 6YJQ

Downloads

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