ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7mbvB3 - ECOD Domain | ECOD

ECOD/Domains/e7mbvB3

e7mbvB3

UID: 005113959

PDB

Range: B:708-716,B:720-785,B:793-814,B:829-846
PDB: 7MBV chain B(all domains)

Molecule: Transient receptor potential melastatin 5

3D Structure

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Related Domains

Browse other domains in YVC1_C →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupAnkyrin repeat(109.3)

TT-groupAnkyrin repeat(109.3.1)

FFamilyYVC1_C(109.3.1.279)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal
N'-[(E)-(3,4-dimethoxyphenyl)methylidene]-2-(naphthalen-1-yl)acetohydrazideYUS

Shown in the structure viewer.

Pfam Families

Calcium channel YVC1-like, C-terminal

ClanCL0030Ion_channel

External Links

ECOD PDB View: 7MBV RCSB PDB: 7MBV PDBe: 7MBV

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Full PDB Structure