ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8cdqA1 - ECOD Domain | ECOD

ECOD/Domains/e8cdqA1

e8cdqA1

UID: 005129714

PDB

Range: A:90-760
PDB: 8CDQ chain A(all domains)

Molecule: Myosin-A

3D Structure

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Related Domains

Browse other domains in Myosin_head →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyMyosin_head(2004.1.1.17)

Ligands

in contact, ≤ 4 Å

Phosphothiophosphoric acid-adenylate esterAGS
1-(4-methoxyphenyl)-~{N}-[(3-thiophen-2-yl-1~{H}-pyrazol-4-yl)methyl]cyclopropan-1-amineKQ0
Magnesium ionMG
metal

+ 4 additives (1,2-ETHANEDIOL, Glycerol, Tetraethylene glycol, …)

1,2-ETHANEDIOLEDO
Glycerol

Pfam Families

PF00063Myosin_head

Myosin head (motor domain)

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 8CDQ RCSB PDB: 8CDQ PDBe: 8CDQ

Downloads

Download Domain PDB Full PDB Structure

Tetraethylene glycolPG4

Sulfate ionSO4

Shown in the structure viewer.