ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8cfnC2 - ECOD Domain | ECOD

ECOD/Domains/e8cfnC2

e8cfnC2

UID: 005130001

PDB

Range: C:201-384
PDB: 8CFN chain C(all domains)
UniProt: Q9I685 (all domains)
Gene: ahcY

Molecule: Adenosylhomocysteinase

3D Structure

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Related Domains

Browse other domains in AdoHcyase_NAD →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupNAD(P)-binding Rossmann-fold domains(2003.1.1)

FFamilyAdoHcyase_NAD(2003.1.1.9)

Ligands

in contact, ≤ 4 Å

AdenineADE
Potassium ionK
metal
Nicotinamide-adenine-dinucleotideNAD

+ 3 additives (Dimethyl sulfoxide, Glycerol, Phosphate ion)

Dimethyl sulfoxideDMS
GlycerolGOL

Pfam Families

PF00670AdoHcyase_NAD

S-adenosyl-L-homocysteine hydrolase, NAD binding domain

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 8CFN RCSB PDB: 8CFN PDBe: 8CFN UniProt: Q9I685

Downloads

Download Domain PDB Full PDB Structure

Phosphate ionPO4

Shown in the structure viewer.