ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1gt8D1 - ECOD Domain | ECOD

ECOD/Domains/e1gt8D1

e1gt8D1

UID: 000051410

PDB

Range: D:2-183
PDB: 1GT8 chain D(all domains)
UniProt: Q28943 (all domains)
Gene: DPYD

Molecule: DIHYDROPYRIMIDINE DEHYDROGENASE

3D Structure

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Related Domains

Browse other domains in Fer4_20 →

Classification

AArchitecturealpha arrays(a.6)

XX-groupalpha-helical ferredoxin-like(187)

HH-groupalpha-helical ferredoxin(187.1)

TT-groupalpha-helical ferredoxin(187.1.1)

FFamilyFer4_20(187.1.1.5)

Ligands

in contact, ≤ 4 Å

Flavin adenine dinucleotideFAD
drugDrugBank DB03147
NADPHNDP
drugDrugBank DB02338

Pfam Families

PF14691Fer4_20

Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster

ClanCL03444Fe-4S

External Links

ECOD PDB View: 1GT8 RCSB PDB: 1GT8 PDBe: 1GT8 UniProt: Q28943

Downloads

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Iron/sulfur cluster

Shown in the structure viewer. Drug annotations from DrugDomain.