ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8hj8A1 - ECOD Domain | ECOD

ECOD/Domains/e8hj8A1

e8hj8A1

UID: 005141575

PDB

Range: A:42-434
PDB: 8HJ8 chain A(all domains)

Molecule: Glyco_hydro_3 domain-containing protein

3D Structure

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Related Domains

Browse other domains in Glyco_hydro_3 →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyGlyco_hydro_3(2002.1.1.39)

Ligands

in contact, ≤ 4 Å

2-deoxy-2-fluoro-alpha-D-glucopyranoseG2F
2-acetamido-2-deoxy-beta-D-glucopyranoseNAG
2-deoxy-2-fluoro-beta-D-glucopyranoseSHG

+ 3 additives (Acetate ion, Glycerol, Sulfate ion)

Acetate ionACT
GlycerolGOL

Pfam Families

PF00933Glyco_hydro_3

Glycosyl hydrolase family 3 N terminal domain

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 8HJ8 RCSB PDB: 8HJ8 PDBe: 8HJ8

Downloads

Download Domain PDB Full PDB Structure

Sulfate ion

Shown in the structure viewer.