ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8ir6V1 - ECOD Domain | ECOD

ECOD/Domains/e8ir6V1

e8ir6V1

UID: 005146997

PDB

Range: V:2-125
PDB: 8IR6 chain V(all domains)

Molecule: Cytochrome c-550

3D Structure

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Related Domains

Browse other domains in Cytochrom_C550 →

Classification

AArchitecturealpha arrays(a.6)

XX-groupCytochrome c-like(107)

HH-groupCytochrome c(107.1)

TT-groupCytochrome c(107.1.1)

FFamilyCytochrom_C550(107.1.1.10)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal
DIGALACTOSYL DIACYL GLYCEROL (DGDG)DGD
Heme cHEC
heptyl 1-thio-beta-D-glucopyranosideHTG

+ 1 additive (Glycerol)

GlycerolGOL

Pfam Families

PF14495Cytochrom_C550

Cytochrome c-550 domain

ClanCL0318Cytochrome-c

External Links

ECOD PDB View: 8IR6 RCSB PDB: 8IR6 PDBe: 8IR6

Downloads

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