ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8j6xB1 - ECOD Domain | ECOD

ECOD/Domains/e8j6xB1

e8j6xB1

UID: 005148638

PDB

Range: B:1-155
PDB: 8J6X chain B(all domains)

Molecule: Nucleoprotein

3D Structure

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Related Domains

Browse other domains in CoV_nucleocap →

Classification

AArchitecturebeta complex topology(a.5)

XX-groupCoronavirus RNA-binding domain (N-terminal part of Pfam 00937)(704)

HH-groupCoronavirus RNA-binding domain (N-terminal part of Pfam 00937)(704.1)

TT-groupCoronavirus RNA-binding domain (N-terminal part of Pfam 00937)(704.1.1)

FFamilyCoV_nucleocap(704.1.1.1)

Ligands

in contact, ≤ 4 Å

~{N}-methyl-~{N}-[(5-phenylmethoxy-1~{H}-indol-3-yl)methyl]propan-1-amineU2H

Shown in the structure viewer.

Pfam Families

PF00937CoV_nucleocap

Coronavirus nucleocapsid

External Links

ECOD PDB View: 8J6X RCSB PDB: 8J6X PDBe: 8J6X

Downloads

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