ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8jviC2 - ECOD Domain | ECOD

ECOD/Domains/e8jviC2

e8jviC2

UID: 005151851

PDB

Range: C:564-640,C:647-653,C:656-659,C:666-767,C:773-800
PDB: 8JVI chain C(all domains)

Molecule: Transient receptor potential cation channel subfamily V member 4,3C-GFP

3D Structure

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Related Domains

Browse other domains in Ion_trans →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupVoltage-gated ion channels(5054)

HH-groupVoltage-gated ion channels(5054.1)

TT-groupVoltage-gated ion channels(5054.1.1)

FFamilyIon_trans(5054.1.1.2)

Ligands

in contact, ≤ 4 Å

[6-[[4-(2,4-dimethyl-1,3-thiazol-5-yl)-1,3-thiazol-2-yl]amino]pyridin-3-yl]-[(1~{S},5~{R})-3-[5-(trifluoromethyl)pyrimidin-2-yl]-3,8-diazabicyclo[3.2.1]octan-8-yl]methanoneF9M

Shown in the structure viewer.

Pfam Families

PF00520Ion_trans

Ion transport protein

ClanCL0030Ion_channel

External Links

ECOD PDB View: 8JVI RCSB PDB: 8JVI PDBe: 8JVI

Downloads

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