ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8jw0C1 - ECOD Domain | ECOD

ECOD/Domains/e8jw0C1

e8jw0C1

UID: 005151892

PDB

Range: C:1-160
PDB: 8JW0 chain C(all domains)

Molecule: Chlorophyll a-chlorophyll c-peridinin-protein-complex I-16, acpPCI-16

3D Structure

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Related Domains

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Classification

AArchitecture—

XX-group—

HH-group—

TT-group—

FFamily—

Ligands

in contact, ≤ 4 Å

Chlorophyll aCLA
(3S,3'R,5R,6S,7cis)-7',8'-didehydro-5,6-dihydro-5,6-epoxy-beta,beta-carotene-3,3'-diolDD6
Chlorophyll c1KC1
PeridininPID
[(1~{S},5~{R})-3,3,5-trimethyl-5-oxidanyl-4-[(3~{E},5~{E},7~{E},9~{E},11~{E},13~{E},15~{E},17~{E})-3,7,12,16-tetramethyl-18-[(1~{S},4~{S},6~{R})-2,2,6-trimethyl-4-oxidanyl-7-oxabicyclo[4.1.0]heptan-1-yl]octadeca-1,3,5,7,9,11,13,15,17-nonaenylidene]cyclohexyl] ethanoateUIX

External Links

ECOD PDB View: 8JW0 RCSB PDB: 8JW0 PDBe: 8JW0

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