ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e8jylC2 - ECOD Domain | ECOD

ECOD/Domains/e8jylC2

e8jylC2

UID: 005152230

PDB

Range: C:168-206,C:212-356
PDB: 8JYL chain C(all domains)

Molecule: Acyl-acyl carrier protein synthetase

3D Structure

Loading viewer...

Related Domains

Browse other domains in AMP-binding →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupCoA-dependent acyltransferases(323)

HH-groupCoA-dependent acyltransferases(323.1)

TT-groupCoA-dependent acyltransferases(323.1.1)

FFamilyAMP-binding(323.1.1.3)

Ligands

in contact, ≤ 4 Å

Magnesium ionMG
metal
[(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methyl N-decanoylsulfamateVUL

Shown in the structure viewer.

Pfam Families

PF00501AMP-binding

AMP-binding enzyme

ClanCL0378ANL

External Links

ECOD PDB View: 8JYL RCSB PDB: 8JYL PDBe: 8JYL

Downloads

Download Domain PDB Full PDB Structure