ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8ohrAAA2 - ECOD Domain | ECOD

ECOD/Domains/e8ohrAAA2

e8ohrAAA2

UID: 005156642

PDB

Range: AAA:1-258
PDB: 8OHR chain AAA(all domains)

Molecule: Heparanase 50 kDa subunit

3D Structure

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Related Domains

Browse other domains in Glyco_hydro_79n →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyGlyco_hydro_79n(2002.1.1.115)

Ligands

in contact, ≤ 4 Å

Chloride ionCL
(3~{S},4~{R})-4,5,5-tris(oxidanyl)piperidine-3-carboxylic acidVP5

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Shown in the structure viewer.

Pfam Families

PF03662Glyco_hydro_79n

Glycosyl hydrolase family 79, N-terminal domain

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 8OHR RCSB PDB: 8OHR PDBe: 8OHR

Downloads

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