ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1lq9A1 - ECOD Domain | ECOD

ECOD/Domains/e1lq9A1

e1lq9A1

UID: 000005157

RepresentativePDB

Range: A:2-113
PDB: 1LQ9 chain A(all domains)
UniProt: Q53908 (all domains)
Gene: actVA

Molecule: ACTVA-ORF6 MONOOXYGENASE

3D Structure

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Related Domains

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Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupDimeric alpha+beta barrel(304.4)

TT-groupDimeric alpha+beta barrel(304.4.1)

FFamilyABM(304.4.1.4)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Tetraethylene glycol)

Tetraethylene glycolPG4

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Antibiotic biosynthesis monooxygenase

ClanCL0032Dim_A_B_barrel

External Links

ECOD PDB View: 1LQ9 RCSB PDB: 1LQ9 PDBe: 1LQ9 UniProt: Q53908

Downloads

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