ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8ovsBBB1 - ECOD Domain | ECOD

ECOD/Domains/e8ovsBBB1

e8ovsBBB1

UID: 005159186

PDB

Range: BBB:1-281
PDB: 8OVS chain BBB(all domains)

Molecule: YeGT glycosyltransferase

3D Structure

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Related Domains

Browse other domains in Gly_transf_sug →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupNucleotide-diphospho-sugar transferases(7516)

HH-groupNucleotide-diphospho-sugar transferases(7516.1)

TT-groupNucleotide-diphospho-sugar transferases(7516.1.1)

FFamilyGly_transf_sug(7516.1.1.67)

Ligands

in contact, ≤ 4 Å

Cadmium ionCD
metal
MANGANESE (II) IONMN
metal
Sodium ionNA
metal
URIDINE-5'-DIPHOSPHATEUDP

+ 2 additives (Acetate ion, 1,2-ETHANEDIOL)

Pfam Families

PF04488Gly_transf_sug

Glycosyltransferase sugar-binding region containing DXD motif

ClanCL0110GT-A

External Links

ECOD PDB View: 8OVS RCSB PDB: 8OVS PDBe: 8OVS

Downloads

Download Domain PDB Full PDB Structure

Acetate ionACT
1,2-ETHANEDIOLEDO

Shown in the structure viewer.