ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8p8gC1 - ECOD Domain | ECOD

ECOD/Domains/e8p8gC1

e8p8gC1

UID: 005161603

PDB

Range: C:1-224
PDB: 8P8G chain C(all domains)

Molecule: Nitrogenase protein alpha chain

3D Structure

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Related Domains

Browse other domains in Oxidored_nitro →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupFlavodoxin-like(2007)

HH-groupClass I glutamine amidotransferase-like(2007.1)

TT-groupChelatase-like(2007.1.14)

FFamilyOxidored_nitro(2007.1.14.1)

Ligands

in contact, ≤ 4 Å

FE(8)-S(7) CLUSTER, OXIDIZED1CL
Chloride ionCL
FE(8)-S(7) CLUSTERCLF
3-HYDROXY-3-CARBOXY-ADIPIC ACIDHCA
iron-sulfur-molybdenum cluster with interstitial carbonICS
Sodium ionNA

Pfam Families

PF00148Oxidored_nitro

Nitrogenase component 1 type Oxidoreductase

ClanCL0043Chelatase

External Links

ECOD PDB View: 8P8G RCSB PDB: 8P8G PDBe: 8P8G

Downloads

Download Domain PDB Full PDB Structure

metal

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Shown in the structure viewer.