ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1mwqA1 - ECOD Domain | ECOD

ECOD/Domains/e1mwqA1

e1mwqA1

UID: 000005165

RepresentativePDB

Range: A:-1-98
PDB: 1MWQ chain A(all domains)
UniProt: P44887 (all domains)
Gene: HI_0828

Molecule: HYPOTHETICAL PROTEIN HI0828

3D Structure

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Related Domains

Browse other domains in YCII →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupDimeric alpha+beta barrel(304.4)

TT-groupDimeric alpha+beta barrel(304.4.1)

FFamilyYCII(304.4.1.3)

Ligands

in contact, ≤ 4 Å

Chloride ionCL
Zinc ionZN
metal

+ 2 additives (Pentaethylene glycol, Cacodylate ion)

Pentaethylene glycol1PE

Pfam Families

YCII-related domain

ClanCL0032Dim_A_B_barrel

External Links

ECOD PDB View: 1MWQ RCSB PDB: 1MWQ PDBe: 1MWQ UniProt: P44887

Downloads

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Cacodylate ionCAC

Shown in the structure viewer. Drug annotations from DrugDomain.