ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8ptsB1 - ECOD Domain | ECOD

ECOD/Domains/e8ptsB1

e8ptsB1

UID: 005165559

PDB

Range: B:1-197
PDB: 8PTS chain B(all domains)

Molecule: Guanylate kinase

3D Structure

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Related Domains

Browse other domains in Guanylate_kin →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyGuanylate_kin(2004.1.1.50)

Ligands

in contact, ≤ 4 Å

[(2~{R},3~{R},4~{R},5~{R})-5-(2-azanyl-6-oxidanylidene-1~{H}-purin-9-yl)-4-fluoranyl-4-methyl-3-oxidanyl-oxolan-2-yl]methyl dihydrogen phosphateEIF

+ 1 additive (Glycerol)

GlycerolGOL

Shown in the structure viewer.

Pfam Families

PF00625Guanylate_kin

Guanylate kinase

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 8PTS RCSB PDB: 8PTS PDBe: 8PTS

Downloads

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