ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8pw1C1 - ECOD Domain | ECOD

ECOD/Domains/e8pw1C1

e8pw1C1

UID: 005165903

PDB

Range: C:2-225
PDB: 8PW1 chain C(all domains)

Molecule: Ubiquitin carboxyl-terminal hydrolase isozyme L1

3D Structure

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Related Domains

Browse other domains in Peptidase_C12 →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupCysteine proteinases-like(219)

HH-groupCysteine proteinases(219.1)

TT-groupCysteine proteinases(219.1.1)

FFamilyPeptidase_C12(219.1.1.9)

Ligands

in contact, ≤ 4 Å

(2~{S})-4-(iminomethyl)-1-methyl-~{N}-[1-[4-(pent-4-ynylcarbamoyl)phenyl]imidazol-4-yl]piperazine-2-carboxamideGKO

Shown in the structure viewer.

Pfam Families

PF01088Peptidase_C12

Ubiquitin carboxyl-terminal hydrolase, family 1

ClanCL0125Peptidase_CA

External Links

ECOD PDB View: 8PW1 RCSB PDB: 8PW1 PDBe: 8PW1

Downloads

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