ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8q2oA1 - ECOD Domain | ECOD

ECOD/Domains/e8q2oA1

e8q2oA1

UID: 005167104

PDB

Range: A:29-479
PDB: 8Q2O chain A(all domains)
UniProt: P18895 (all domains)
Gene: algE

Molecule: Alginate production protein AlgE

3D Structure

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Related Domains

Browse other domains in Alginate_exp →

Classification

AArchitecturebeta barrels(a.1)

XX-groupOuter membrane meander beta-barrels(5084)

HH-groupPorins(5084.5)

TT-groupMaltoporin-like(5084.5.2)

FFamilyAlginate_exp(5084.5.2.2)

Ligands

in contact, ≤ 4 Å

[(2~{S})-2,3-bis(oxidanyl)propyl] 8-hexylselanyloctanoateIRY
Sodium ionNA
metal
3,6,9,12,15,18,21,24-OCTAOXAHEXACOSAN-1-OLPE5

+ 3 additives ((HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, Citrate anion, Sulfate ion)

(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANEC8E
Citrate anion

Pfam Families

PF13372Alginate_exp

Alginate export

ClanCL0193MBB

External Links

ECOD PDB View: 8Q2O RCSB PDB: 8Q2O PDBe: 8Q2O UniProt: P18895

Downloads

Download Domain PDB Full PDB Structure

Sulfate ionSO4

Shown in the structure viewer.