ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8qezB1 - ECOD Domain | ECOD

ECOD/Domains/e8qezB1

e8qezB1

UID: 005169138

PDB

Range: B:1-108,B:219-263
PDB: 8QEZ chain B(all domains)
UniProt: P19491 (all domains)
Gene: Gria2

Molecule: Glutamate receptor 2

3D Structure

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Related Domains

Browse other domains in Lig_chan-Glu_bd →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPeriplasmic binding protein-like II(7523)

HH-groupPeriplasmic binding protein-like II(7523.1)

TT-groupPeriplasmic binding protein-like II(7523.1.1)

FFamilyLig_chan-Glu_bd(7523.1.1.20)

Ligands

in contact, ≤ 4 Å

Chloride ionCL
Glutamic acidGLU
6-chloranyl-4-cyclopropyl-2,3-dihydrothieno[3,2-e][1,2,4]thiadiazine 1,1-dioxideUF5
Zinc ionZN
metal

+ 2 additives (Acetate ion, Cacodylate ion)

Acetate ionACT

Pfam Families

PF10613Lig_chan-Glu_bd

Ligated ion channel L-glutamate- and glycine-binding site

ClanCL0177PBP

External Links

ECOD PDB View: 8QEZ RCSB PDB: 8QEZ PDBe: 8QEZ UniProt: P19491

Downloads

Download Domain PDB Full PDB Structure

Cacodylate ionCAC

Shown in the structure viewer.