ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8qgwD1 - ECOD Domain | ECOD

ECOD/Domains/e8qgwD1

e8qgwD1

UID: 005169321

PDB

Range: D:30-249
PDB: 8QGW chain D(all domains)
UniProt: O66841 (all domains)
Gene: nuoF

Molecule: NADH-quinone oxidoreductase subunit F

3D Structure

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Related Domains

Browse other domains in Complex1_51K →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupNqo1 FMN-binding domain-like(4335)

HH-groupNqo1 FMN-binding domain-like(4335.1)

TT-groupNqo1 FMN-binding domain-like(4335.1.1)

FFamilyComplex1_51K(4335.1.1.1)

Ligands

in contact, ≤ 4 Å

3-ACETYLPYRIDINE ADENINE DINUCLEOTIDEA3D
Flavin mononucleotideFMN
Sodium ionNA
metal
Iron/sulfur clusterSF4

+ 2 additives (Glycerol, Sulfate ion)

GlycerolGOL

Pfam Families

PF01512Complex1_51K

Nuo51 FMN-binding domain

ClanCL0867NqrA_FMN-like

External Links

ECOD PDB View: 8QGW RCSB PDB: 8QGW PDBe: 8QGW UniProt: O66841

Downloads

Download Domain PDB Full PDB Structure

Sulfate ionSO4

Shown in the structure viewer.