ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8qh4B1 - ECOD Domain | ECOD

ECOD/Domains/e8qh4B1

e8qh4B1

UID: 005169337

PDB

Range: B:30-249
PDB: 8QH4 chain B(all domains)
UniProt: O66841 (all domains)
Gene: nuoF

Molecule: NADH-quinone oxidoreductase subunit F

3D Structure

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Related Domains

Browse other domains in Complex1_51K →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupNqo1 FMN-binding domain-like(4335)

HH-groupNqo1 FMN-binding domain-like(4335.1)

TT-groupNqo1 FMN-binding domain-like(4335.1.1)

FFamilyComplex1_51K(4335.1.1.1)

Ligands

in contact, ≤ 4 Å

3-ACETYLPYRIDINE ADENINE DINUCLEOTIDEA3D
1-DEOXY-1-(7,8-DIMETHYL-2,4-DIOXO-3,4-DIHYDRO-2H-BENZO[G]PTERIDIN-1-ID-10(5H)-YL)-5-O-PHOSPHONATO-D-RIBITOLFNR
Sodium ionNA
metal
Iron/sulfur clusterSF4

+ 2 additives (Glycerol, Sulfate ion)

Glycerol

Pfam Families

PF01512Complex1_51K

Nuo51 FMN-binding domain

ClanCL0867NqrA_FMN-like

External Links

ECOD PDB View: 8QH4 RCSB PDB: 8QH4 PDBe: 8QH4 UniProt: O66841

Downloads

Download Domain PDB Full PDB Structure

Sulfate ionSO4

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