ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8qzbC2 - ECOD Domain | ECOD

ECOD/Domains/e8qzbC2

e8qzbC2

UID: 005173014

PDB

Range: C:92-277
PDB: 8QZB chain C(all domains)
UniProt: Q2VEQ7 (all domains)
Gene: ddh

Molecule: D-2-hydroxyacid dehydrogenase

3D Structure

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Related Domains

Browse other domains in 2-Hacid_dh_C →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupNAD(P)-binding Rossmann-fold domains(2003.1.1)

FFamily2-Hacid_dh_C(2003.1.1.37)

Ligands

in contact, ≤ 4 Å

2-Ketohexanoic acid7N5
Chloride ionCL
Magnesium ionMG
metal
Sodium ionNA
metal
Nicotinamide-adenine-dinucleotideNAD

Pfam Families

PF028262-Hacid_dh_C

D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 8QZB RCSB PDB: 8QZB PDBe: 8QZB UniProt: Q2VEQ7

Downloads

Download Domain PDB Full PDB Structure

+ 1 additive (Acetate ion)

Acetate ionACT

Shown in the structure viewer.