ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8reaM2 - ECOD Domain | ECOD

ECOD/Domains/e8reaM2

e8reaM2

UID: 005177062

PDB

Range: M:172-318
PDB: 8REA chain M(all domains)

Molecule: RNA polymerase sigma-54 factor

3D Structure

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Related Domains

Browse other domains in Sigma-54, DNA binding domain / Sigma-54 factor, core binding domain →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupHTH(101.1)

TT-groupThree-helical HTH(101.1.1)

FFamilySigma-54, DNA binding domain / Sigma-54 factor, core binding domain(101.1.1.33)

Pfam Families

PF04552Sigma54_DBD

Sigma-54, DNA binding domain

ClanCL0123HTH

PF04963Sigma54_CBD

Sigma-54 factor, core binding domain

ClanCL0123HTH

External Links

ECOD PDB View: 8REA RCSB PDB: 8REA PDBe: 8REA

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Full PDB Structure