ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8rfdA1 - ECOD Domain | ECOD

ECOD/Domains/e8rfdA1

e8rfdA1

UID: 005177234

PDB

Range: A:1-118
PDB: 8RFD chain A(all domains)

Molecule: Host translation inhibitor nsp1

3D Structure

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Related Domains

Browse other domains in bCoV_NSP1 →

Classification

AArchitecturebeta complex topology(a.5)

XX-groupCoronavirus nsp1(4356)

HH-groupCoronavirus nsp1(4356.1)

TT-groupCoronavirus nsp1(4356.1.1)

FFamilybCoV_NSP1(4356.1.1.1)

Ligands

in contact, ≤ 4 Å

(1~{R})-1-(4-iodophenyl)ethanamineA1H0J

Shown in the structure viewer.

Pfam Families

PF11501bCoV_NSP1

Betacoronavirus replicase NSP1

External Links

ECOD PDB View: 8RFD RCSB PDB: 8RFD PDBe: 8RFD

Downloads

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