ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8ri8D2 - ECOD Domain | ECOD

ECOD/Domains/e8ri8D2

e8ri8D2

UID: 005178042

PDB

Range: D:341-509,D:521-632
PDB: 8RI8 chain D(all domains)

Molecule: Beta-galactosidase

3D Structure

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Related Domains

Browse other domains in Glyco_hydro_2_C →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyGlyco_hydro_2_C(2002.1.1.104)

Ligands

in contact, ≤ 4 Å

(2S,3R,4S)-2-[bis(oxidanyl)methyl]pyrrolidine-3,4-diolA1H05
Magnesium ionMG
metal
Sodium ionNA
metal

Shown in the structure viewer.

Pfam Families

PF02836Glyco_hydro_2_C

Glycosyl hydrolases family 2, TIM barrel domain

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 8RI8 RCSB PDB: 8RI8 PDBe: 8RI8

Downloads

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