ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e8rqpA1 - ECOD Domain | ECOD

ECOD/Domains/e8rqpA1

e8rqpA1

UID: 005179934

PDB

Range: A:29-479
PDB: 8RQP chain A(all domains)
UniProt: P18895 (all domains)
Gene: algE

Molecule: Alginate production protein AlgE

3D Structure

Loading viewer...

Related Domains

Browse other domains in Alginate_exp →

Classification

AArchitecturebeta barrels(a.1)

XX-groupOuter membrane meander beta-barrels(5084)

HH-groupPorins(5084.5)

TT-groupMaltoporin-like(5084.5.2)

FFamilyAlginate_exp(5084.5.2.2)

Ligands

in contact, ≤ 4 Å

7.10 monoacylglycerol (S-form)A1H2K
7.10 monoacylglycerol (R-form)A1H52
Calcium ionCA
metal
Sodium ionNA
metal
Hexaethylene glycolP6G

Pfam Families

PF13372Alginate_exp

Alginate export

ClanCL0193MBB

External Links

ECOD PDB View: 8RQP RCSB PDB: 8RQP PDBe: 8RQP UniProt: P18895

Downloads

Download Domain PDB Full PDB Structure

+ 3 additives (Citric acid, Glycerol, Sulfate ion)

Citric acidCIT
GlycerolGOL
Sulfate ionSO4

Shown in the structure viewer.