ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e8s3dB2 - ECOD Domain | ECOD

ECOD/Domains/e8s3dB2

e8s3dB2

UID: 005182623

PDB

Range: B:182-411
PDB: 8S3D chain B(all domains)

Molecule: Glutamate dehydrogenase

3D Structure

Loading viewer...

Related Domains

Browse other domains in ELFV_dehydrog →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupNAD(P)-binding Rossmann-fold domains(2003.1.1)

FFamilyELFV_dehydrog(2003.1.1.7)

Ligands

in contact, ≤ 4 Å

(2S)-2-azanyl-2-oxidanyl-pentanedioic acid8GL
GlycineGLY
Nicotinamide-adenine-dinucleotideNAD

+ 3 additives (1,2-ETHANEDIOL, Tetraethylene glycol, Triethylene glycol)

1,2-ETHANEDIOLEDO
Tetraethylene glycolPG4
Triethylene glycol

Pfam Families

PF00208ELFV_dehydrog

Glutamate/Leucine/Phenylalanine/Valine dehydrogenase

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 8S3D RCSB PDB: 8S3D PDBe: 8S3D

Downloads

Download Domain PDB Full PDB Structure

Shown in the structure viewer.