ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e8topT1 - ECOD Domain | ECOD

ECOD/Domains/e8topT1

e8topT1

UID: 005192941

PDB

Range: T:7-36,T:58-153
PDB: 8TOP chain T(all domains)
UniProt: Q2N0S5 (all domains)
Gene: env

Molecule: HIV-1 BG505 DS-SOSIP glycoprotein gp41

3D Structure

Loading viewer...

Related Domains

Browse other domains in GP41 →

Classification

AArchitecturea+b duplicates or obligate multimers(a.15)

XX-groupMPER trimer(3567)

HH-groupMPER trimer(3567.1)

TT-groupMPER trimer(3567.1.1)

FFamilyGP41(3567.1.1.2)

Pfam Families

Retroviral envelope protein

External Links

ECOD PDB View: 8TOP RCSB PDB: 8TOP PDBe: 8TOP UniProt: Q2N0S5

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure