ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8towF1 - ECOD Domain | ECOD

ECOD/Domains/e8towF1

e8towF1

UID: 005192995

PDB

Range: F:13-44
PDB: 8TOW chain F(all domains)
UniProt: P09191 (all domains)
Gene: psbF

Molecule: Cytochrome b559 subunit beta

3D Structure

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Related Domains

Browse other domains in Cytochrom_B559 →

Classification

AArchitectureextended segments(a.20)

XX-groupCytochrome b559 subunits(5036)

HH-groupCytochrome b559 subunits(5036.1)

TT-groupCytochrome b559 subunits(5036.1.1)

FFamilyCytochrom_B559(5036.1.1.1)

Ligands

in contact, ≤ 4 Å

Beta-caroteneBCR
Chlorophyll aCLA
Protoporphyrin ix containing feHEM
1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDELMG
2,3-DIMETHYL-5-(3,7,11,15,19,23,27,31,35-NONAMETHYL-2,6,10,14,18,22,26,30,34-HEXATRIACONTANONAENYL-2,5-CYCLOHEXADIENE-1,4-DIONE-2,3-DIMETHYL-5-SOLANESYL-1,4-BENZOQUINONEPL9
1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL

Pfam Families

PF00283Cytochrom_B559

Cytochrome b559, alpha (gene psbE) and beta (gene psbF)subunits

External Links

ECOD PDB View: 8TOW RCSB PDB: 8TOW PDBe: 8TOW UniProt: P09191

Downloads

Download Domain PDB Full PDB Structure

+ 1 additive (Dodecyl-beta-d-maltoside)

Dodecyl-beta-d-maltosideLMT

Shown in the structure viewer.