ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8u7cD1 - ECOD Domain | ECOD

ECOD/Domains/e8u7cD1

e8u7cD1

UID: 005196391

PDB

Range: D:1-67
PDB: 8U7C chain D(all domains)

Molecule: Engineered NEMO minimal IKK-binding domain

3D Structure

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Related Domains

Browse other domains in NEMO →

Classification

AArchitecturealpha bundles(a.7)

XX-groupHelical domain in structural maintenance of chromosomes protein 3(3922)

HH-groupHelical domain in structural maintenance of chromosomes protein 3(3922.1)

TT-groupHelical domain in structural maintenance of chromosomes protein 3(3922.1.1)

FFamilyNEMO(3922.1.1.3)

Ligands

in contact, ≤ 4 Å

pentane-1,5-diol9JE
ProlinePRO
TERBIUM(III) IONTB
metal
YTTRIUM (III) IONYT3
metal

+ 2 additives (2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Tetraethylene glycol)

Pfam Families

NF-kappa-B essential modulator NEMO

External Links

ECOD PDB View: 8U7C RCSB PDB: 8U7C PDBe: 8U7C

Downloads

Download Domain PDB Full PDB Structure

2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL

Tetraethylene glycolPG4

Shown in the structure viewer.