ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e8ugj1L1 - ECOD Domain | ECOD

ECOD/Domains/e8ugj1L1

e8ugj1L1

UID: 005199537

PDB

Range: 1L:5-598
PDB: 8UGJ chain 1L(all domains)
UniProt: Q9TDR1 (all domains)
Gene: MT-ND5

Molecule: NADH-ubiquinone oxidoreductase chain 5

3D Structure

Loading viewer...

Related Domains

Browse other domains in Proton_antipo_M,Proton_antipo_N,NADH5_C →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupSodium/proton antiporter subunits-like(3281)

HH-groupSodium/proton antiporter subunits-like(3281.1)

TT-groupNADH-quinone oxidoreductase subunit L (NuoL)-related(3281.1.1)

FFamilyProton_antipo_M,Proton_antipo_N,NADH5_C(3281.1.1.4)

Ligands

in contact, ≤ 4 Å

1,2-Distearoyl-sn-glycerophosphoethanolamine3PE
CardiolipinCDL
Cholic acidCHD
~{S}-[2-[3-[[(2~{R})-3,3-dimethyl-2-oxidanyl-4-phosphonooxy-butanoyl]amino]propanoylamino]ethyl] (3~{S})-3-oxidanyltetradecanethioateEHZ
Myristic acidMYR
1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE

Pfam Families

PF00361Proton_antipo_M

NADH:quinone oxidoreductase/Mrp antiporter, TM

ClanCL0425ComplexI-N

PF00662Proton_antipo_N

NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus

PF06455NADH5_C

NADH dehydrogenase subunit 5 C-terminus

External Links

ECOD PDB View: 8UGJ RCSB PDB: 8UGJ PDBe: 8UGJ UniProt: Q9TDR1

Downloads

Download Domain PDB Full PDB Structure

(1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATEPGV

Shown in the structure viewer.