ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1t9mA1 - ECOD Domain | ECOD

ECOD/Domains/e1t9mA1

e1t9mA1

UID: 000000052

RepresentativePDB

Range: A:11-214
PDB: 1T9M chain A(all domains)
UniProt: O69755 (all domains)
Gene: phzG

Molecule: probable pyridoxamine 5'-phosphate oxidase

3D Structure

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Related Domains

Browse other domains in Putative_PNPOx,PNP_phzG_C →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupFMN-binding split barrel(1.1.5)

FFamilyPutative_PNPOx,PNP_phzG_C(1.1.5.9)

Ligands

in contact, ≤ 4 Å

Flavin mononucleotideFMN
drugDrugBank DB03247

+ 2 additives (Acetic acid, Sulfate ion)

Acetic acidACY
DrugBank DB03166

Pfam Families

PF01243PNPOx_N

Pyridoxamine 5'-phosphate oxidase

ClanCL0336FMN-binding

PF10590PNP_phzG_C

Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region

External Links

ECOD PDB View: 1T9M RCSB PDB: 1T9M PDBe: 1T9M UniProt: O69755

Downloads

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Sulfate ion

DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.