ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8uswC3 - ECOD Domain | ECOD

ECOD/Domains/e8uswC3

e8uswC3

UID: 005204283

PDB

Range: C:417-422,C:427-435,C:437-446,C:449-485,C:488-493,C:498-558,C:681-683,C:697-698,C:784-794,C:796-834
PDB: 8USW chain C(all domains)

Molecule: Glutamate receptor ionotropic, NMDA 1

3D Structure

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Related Domains

Browse other domains in Lig_chan-Glu_bd →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPeriplasmic binding protein-like II(7523)

HH-groupPeriplasmic binding protein-like II(7523.1)

TT-groupPeriplasmic binding protein-like II(7523.1.1)

FFamilyLig_chan-Glu_bd(7523.1.1.20)

Ligands

in contact, ≤ 4 Å

7-nitro-2,3-dioxo-1,2,3,4-tetrahydroquinoxaline-6-carbonitrileDQC

Shown in the structure viewer.

Pfam Families

PF10613Lig_chan-Glu_bd

Ligated ion channel L-glutamate- and glycine-binding site

ClanCL0177PBP

External Links

ECOD PDB View: 8USW RCSB PDB: 8USW PDBe: 8USW

Downloads

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