ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2i0kA1 - ECOD Domain | ECOD

ECOD/Domains/e2i0kA1

e2i0kA1

UID: 000005213

RepresentativePDB

Range: A:274-329,A:350-613
PDB: 2I0K chain A(all domains)
UniProt: Q7SID9 (all domains)

Molecule: Oxidoreductase

3D Structure

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Related Domains

Browse other domains in Chol_subst-bind →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupFAD-linked oxidases, C-terminal domain(304.6)

TT-groupFAD-linked oxidases, C-terminal domain(304.6.1)

FFamilyChol_subst-bind(304.6.1.4)

Ligands

in contact, ≤ 4 Å

Flavin adenine dinucleotideFAD
drugDrugBank DB03147
MANGANESE (II) IONMN
metal

+ 2 additives (Glycerin, Cacodylate ion)

Pfam Families

PF09129Chol_subst-bind

Cholesterol oxidase, substrate-binding

ClanCL0277FAD-oxidase_C

External Links

ECOD PDB View: 2I0K RCSB PDB: 2I0K PDBe: 2I0K UniProt: Q7SID9

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

GlycerinGOL

DrugBank DB09462

Cacodylate ionCAC

Shown in the structure viewer. Drug annotations from DrugDomain.