ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e1r6oB1 - ECOD Domain | ECOD

ECOD/Domains/e1r6oB1

e1r6oB1

UID: 000052218

PDB

Range: B:1-141
PDB: 1R6O chain B(all domains)
UniProt: P0ABH9 (all domains)
Gene: clpA

Molecule: ATP-dependent Clp protease ATP-binding subunit clpA

3D Structure

Loading viewer...

Related Domains

Browse other domains in Clp_N →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHistone-like(148)

HH-groupHistone-related(148.1)

TT-groupdouble Clp-N(148.1.2)

FFamilyClp_N(148.1.2.1)

Ligands

in contact, ≤ 4 Å

Chloride ionCL
BIS-(2-HYDROXYETHYL)AMINO-TRIS(HYDROXYMETHYL)METHANE YTTRIUMYBT
Zinc ionZN

Pfam Families

Clp repeat (R) N-terminal domain

External Links

ECOD PDB View: 1R6O RCSB PDB: 1R6O PDBe: 1R6O UniProt: P0ABH9

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

metal

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.