ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1mbuB1 - ECOD Domain | ECOD

ECOD/Domains/e1mbuB1

e1mbuB1

UID: 000052226

PDB

Range: B:1-142
PDB: 1MBU chain B(all domains)
UniProt: P0ABH9 (all domains)
Gene: clpA

Molecule: ATP-Dependent clp Protease ATP-Binding Subunit clp A

3D Structure

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Related Domains

Browse other domains in Clp_N →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHistone-like(148)

HH-groupHistone-related(148.1)

TT-groupdouble Clp-N(148.1.2)

FFamilyClp_N(148.1.2.1)

Ligands

in contact, ≤ 4 Å

Chloride ionCL
BIS-(2-HYDROXYETHYL)AMINO-TRIS(HYDROXYMETHYL)METHANE YTTRIUMYBT

+ 1 additive (Glycerin)

GlycerinGOL

Pfam Families

Clp repeat (R) N-terminal domain

External Links

ECOD PDB View: 1MBU RCSB PDB: 1MBU PDBe: 1MBU UniProt: P0ABH9

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.