ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8wmji1 - ECOD Domain | ECOD

ECOD/Domains/e8wmji1

e8wmji1

UID: 005222798

PDB

Range: i:47-211
PDB: 8WMJ chain i(all domains)

Molecule: CAC-i

3D Structure

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Related Domains

Browse other domains in Chloroa_b-bind →

Classification

AArchitectureextended segments(a.20)

XX-groupChlorophyll a-b binding protein(5077)

HH-groupChlorophyll a-b binding protein(5077.1)

TT-groupChlorophyll a-b binding protein(5077.1.1)

FFamilyChloroa_b-bind(5077.1.1.1)

Ligands

in contact, ≤ 4 Å

Chlorophyll aCLA
(1~{R})-3,5,5-trimethyl-4-[(3~{E},5~{E},7~{E},9~{E},11~{E},13~{E},15~{E})-3,7,12,16-tetramethyl-18-[(4~{R})-2,6,6-trimethyl-4-oxidanyl-cyclohexen-1-yl]octadeca-3,5,7,9,11,13,15-heptaen-1,17-diynyl]cyclohex-3-en-1-olII0
Chlorophyll c2KC2
1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLELHG
Dodecyl-alpha-d-maltosideLMU

Pfam Families

PF00504Chloroa_b-bind

Chlorophyll A-B binding protein

External Links

ECOD PDB View: 8WMJ RCSB PDB: 8WMJ PDBe: 8WMJ

Downloads

Download Domain PDB Full PDB Structure

1,3,3-trimethyl-2-[(1E,3E,5E,7E,9E,11E,13E,15E,17E)-3,7,12,16-tetramethyl-18-[(1R)-2,6,6-trimethylcyclohex-2-en-1-yl]octadeca-1,3,5,7,9,11,13,15,17-nonaenyl]cyclohexene

Shown in the structure viewer.