ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8x35B1 - ECOD Domain | ECOD

ECOD/Domains/e8x35B1

e8x35B1

UID: 005227372

PDB

Range: B:75-303
PDB: 8X35 chain B(all domains)

Molecule: Neryl diphosphate synthase 1

3D Structure

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Related Domains

Browse other domains in Prenyltransf →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupUndecaprenyl diphosphate synthase(7534)

HH-groupUndecaprenyl diphosphate synthase(7534.1)

TT-groupUndecaprenyl diphosphate synthase(7534.1.1)

FFamilyPrenyltransf(7534.1.1.1)

Ligands

in contact, ≤ 4 Å

DiphosphateDPO
Dimethylallyl s-thiolodiphosphateDST
3-METHYLBUT-3-ENYL TRIHYDROGEN DIPHOSPHATEIPE
Magnesium ionMG
metal

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Pfam Families

PF01255Prenyltransf

Putative undecaprenyl diphosphate synthase

External Links

ECOD PDB View: 8X35 RCSB PDB: 8X35 PDBe: 8X35

Downloads

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