ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8xdyB1 - ECOD Domain | ECOD

ECOD/Domains/e8xdyB1

e8xdyB1

UID: 005228970

PDB

Range: B:36-241
PDB: 8XDY chain B(all domains)

Molecule: norbelladine O-methyltransferase

3D Structure

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Related Domains

Browse other domains in Methyltransf_3 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupS-adenosyl-L-methionine-dependent methyltransferases(2003.1.5)

FFamilyMethyltransf_3(2003.1.5.14)

Ligands

in contact, ≤ 4 Å

Protocatechuic aldehydeH6N
Magnesium ionMG
metal
S-adenosyl-l-homocysteineSAH

+ 2 additives (Glycerol, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL)

GlycerolGOL
2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOLTRS

Pfam Families

PF01596Methyltransf_3

O-methyltransferase

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 8XDY RCSB PDB: 8XDY PDBe: 8XDY

Downloads

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