ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8xgaD1 - ECOD Domain | ECOD

ECOD/Domains/e8xgaD1

e8xgaD1

UID: 005229192

PDB

Range: D:1-313
PDB: 8XGA chain D(all domains)

Molecule: Glutaminyl-peptide cyclotransferase-like protein

3D Structure

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Related Domains

Browse other domains in Peptidase_M28 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPhosphorylase/hydrolase-like(2011)

HH-groupZn-dependent exopeptidases(2011.1)

TT-groupZn-dependent exopeptidases(2011.1.1)

FFamilyPeptidase_M28(2011.1.1.8)

Ligands

in contact, ≤ 4 Å

(3~{Z})-3-(1~{H}-benzimidazol-5-ylmethylidene)-4-(oxan-4-yloxy)-1~{H}-indol-2-oneA1D47
Zinc ionZN
metal

Shown in the structure viewer.

Pfam Families

PF04389Peptidase_M28

Peptidase family M28

ClanCL0865ZnExoPePases

External Links

ECOD PDB View: 8XGA RCSB PDB: 8XGA PDBe: 8XGA

Downloads

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