ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8y5bA1 - ECOD Domain | ECOD

ECOD/Domains/e8y5bA1

e8y5bA1

UID: 005235650

PDB

Range: A:1-182
PDB: 8Y5B chain A(all domains)

Molecule: E3 ubiquitin-protein ligase TRIM21

3D Structure

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Related Domains

Browse other domains in SPRY,PRY →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupConcanavalin A-like(10.1)

TT-groupConcanavalin A-like lectins/glucanases(10.1.1)

FFamilySPRY,PRY(10.1.1.9)

Ligands

in contact, ≤ 4 Å

(1~{R})-1-[10-[3-(dimethylamino)propyl]phenothiazin-2-yl]ethanolA1D5Z

Shown in the structure viewer.

Pfam Families

SPRY domain

ClanCL0004Concanavalin

SPRY-associated domain

ClanCL0004Concanavalin

External Links

ECOD PDB View: 8Y5B RCSB PDB: 8Y5B PDBe: 8Y5B

Downloads

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