ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8y88C1 - ECOD Domain | ECOD

ECOD/Domains/e8y88C1

e8y88C1

UID: 005237035

PDB

Range: C:1-282,C:691-696,C:716-716,C:733-737
PDB: 8Y88 chain C(all domains)

Molecule: Spike glycoprotein

3D Structure

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Related Domains

Browse other domains in bCoV_S1_N →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupConcanavalin A-like(10.1)

TT-groupConcanavalin A-like lectins/glucanases(10.1.1)

FFamilybCoV_S1_N(10.1.1.39)

Pfam Families

PF16451bCoV_S1_N

Betacoronavirus-like spike glycoprotein S1, N-terminal

ClanCL0004Concanavalin

External Links

ECOD PDB View: 8Y88 RCSB PDB: 8Y88 PDBe: 8Y88

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Full PDB Structure