ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8yj9A1 - ECOD Domain | ECOD

ECOD/Domains/e8yj9A1

e8yj9A1

UID: 005239291

PDB

Range: A:1-237
PDB: 8YJ9 chain A(all domains)
UniProt: P02866 (all domains)

Molecule: Concanavalin-Br

3D Structure

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Related Domains

Browse other domains in Lectin_legB →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupConcanavalin A-like(10.1)

TT-groupConcanavalin A-like lectins/glucanases(10.1.1)

FFamilyLectin_legB(10.1.1.2)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal
MANGANESE (II) IONMN
metal
L-riboseROR

+ 2 additives (Glycerol, Sulfate ion)

GlycerolGOL
Sulfate ion

Pfam Families

PF00139Lectin_legB

Legume lectin domain

ClanCL0004Concanavalin

External Links

ECOD PDB View: 8YJ9 RCSB PDB: 8YJ9 PDBe: 8YJ9 UniProt: P02866

Downloads

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