ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8yp4B1 - ECOD Domain | ECOD

ECOD/Domains/e8yp4B1

e8yp4B1

UID: 005240827

PDB

Range: B:70-348
PDB: 8YP4 chain B(all domains)

Molecule: Dual specificity mitogen-activated protein kinase kinase 1

3D Structure

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Related Domains

Browse other domains in Pkinase, ABC1 →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupProtein kinase/SAICAR synthase/ATP-grasp(206)

HH-groupProtein kinase/SAICAR synthase/ATP-grasp(206.1)

TT-groupProtein kinase(206.1.1)

FFamilyPkinase, ABC1(206.1.1.70)

Ligands

in contact, ≤ 4 Å

(4~{S},9~{S},10~{S},12~{E})-16-methoxy-4-methyl-9,10,18-tris(oxidanyl)-3-oxabicyclo[12.4.0]octadeca-1(18),12,14,16-tetraene-2,8-dioneWNT

+ 1 additive (Glycerol)

GlycerolGOL

Shown in the structure viewer.

Pfam Families

PF00069Pkinase

Protein kinase domain

ClanCL0016PKinase

ABC1 atypical kinase-like domain

ClanCL0016PKinase

External Links

ECOD PDB View: 8YP4 RCSB PDB: 8YP4 PDBe: 8YP4

Downloads

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