ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8yruA1 - ECOD Domain | ECOD

ECOD/Domains/e8yruA1

e8yruA1

UID: 005241328

PDB

Range: A:2-118
PDB: 8YRU chain A(all domains)

Molecule: Aminotransferase class IV

3D Structure

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Related Domains

Browse other domains in Aminotran_4 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupa+b domain in D-aminoacid aminotransferase-like PLP-dependent enzymes(4020)

HH-groupa+b domain in D-aminoacid aminotransferase-like PLP-dependent enzymes(4020.1)

TT-groupa+b domain in D-aminoacid aminotransferase-like PLP-dependent enzymes(4020.1.1)

FFamilyAminotran_4(4020.1.1.1)

Ligands

in contact, ≤ 4 Å

[6-methyl-5-oxidanyl-4-[(2-phenylhydrazinyl)methyl]pyridin-3-yl]methyl dihydrogen phosphateZXN

+ 1 additive (Acetate ion)

Acetate ionACT

Shown in the structure viewer.

Pfam Families

PF01063Aminotran_4

Amino-transferase class IV

External Links

ECOD PDB View: 8YRU RCSB PDB: 8YRU PDBe: 8YRU

Downloads

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