ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8yruA2 - ECOD Domain | ECOD

ECOD/Domains/e8yruA2

e8yruA2

UID: 005241329

PDB

Range: A:117-283
PDB: 8YRU chain A(all domains)

Molecule: Aminotransferase class IV

3D Structure

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Related Domains

Browse other domains in Aminotran_4 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupbarrel domain in D-aminoacid aminotransferase-like PLP-dependent enzymes(4045)

HH-groupbarrel domain in D-aminoacid aminotransferase-like PLP-dependent enzymes(4045.1)

TT-groupbarrel domain in D-aminoacid aminotransferase-like PLP-dependent enzymes(4045.1.1)

FFamilyAminotran_4(4045.1.1.1)

Ligands

in contact, ≤ 4 Å

[6-methyl-5-oxidanyl-4-[(2-phenylhydrazinyl)methyl]pyridin-3-yl]methyl dihydrogen phosphateZXN

+ 1 additive (Acetate ion)

Acetate ionACT

Shown in the structure viewer.

Pfam Families

PF01063Aminotran_4

Amino-transferase class IV

External Links

ECOD PDB View: 8YRU RCSB PDB: 8YRU PDBe: 8YRU

Downloads

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