ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8zy5C3 - ECOD Domain | ECOD

ECOD/Domains/e8zy5C3

e8zy5C3

UID: 005248817

PDB

Range: C:581-585,C:590-596,C:602-616,C:618-643,C:655-729,C:739-748,C:751-760,C:769-796
PDB: 8ZY5 chain C(all domains)

Molecule: Spike glycoprotein

3D Structure

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Related Domains

Browse other domains in CoV_S2 →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupS2 subunit of coronavirus spike glycoprotein(1042)

HH-groupS2 subunit of coronavirus spike glycoprotein(1042.1)

TT-groupS2 subunit of coronavirus spike glycoprotein(1042.1.1)

FFamilyCoV_S2(1042.1.1.1)

Ligands

in contact, ≤ 4 Å

2-acetamido-2-deoxy-beta-D-glucopyranoseNAG

Shown in the structure viewer.

Pfam Families

Coronavirus spike glycoprotein S2

ClanCL0595Fusion_gly

External Links

ECOD PDB View: 8ZY5 RCSB PDB: 8ZY5 PDBe: 8ZY5

Downloads

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