ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e9aytP1 - ECOD Domain | ECOD

ECOD/Domains/e9aytP1

e9aytP1

UID: 005250536

PDB

Range: P:22-164,P:184-297
PDB: 9AYT chain P(all domains)
UniProt: A0A023DFE8 (all domains)
Gene: GCA01S_030_00190

Molecule: GcL lactonase

3D Structure

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Related Domains

Browse other domains in Lactamase_B →

Classification

AArchitecturea+b four layers(a.13)

XX-groupMetallo-hydrolase/oxidoreductase(247)

HH-groupMetallo-hydrolase/oxidoreductase(247.1)

TT-groupMetallo-hydrolase/oxidoreductase(247.1.1)

FFamilyLactamase_B(247.1.1.1)

Ligands

in contact, ≤ 4 Å

COBALT (II) IONCO
metal
FE (III) IONFE
metal
N-[(3S)-2-oxotetrahydrofuran-3-yl]hexanamideHL6

+ 4 additives (Pentaethylene glycol, Acetate ion, 1,2-ETHANEDIOL, …)

Pentaethylene glycol1PE

Pfam Families

PF00753Lactamase_B

Metallo-beta-lactamase superfamily

ClanCL0381Metallo-HOrase

External Links

ECOD PDB View: 9AYT RCSB PDB: 9AYT PDBe: 9AYT UniProt: A0A023DFE8

Downloads

Download Domain PDB Full PDB Structure

Acetate ion

1,2-ETHANEDIOLEDO

Sulfate ionSO4

Shown in the structure viewer.